Identification of quantitative trait loci for drought tolerance in Bukoba/Kijivu Andean mapping population of common bean

Swivia M. Hamabwe, Nicholas Amimo Otieno, Alvaro Soler-Garzón, Phillip N. Miklas, Travis Parker, David M. Kramer, Abhijnan Chattopadhyay, Pride Cheelo, Kuwabo Kuwabo & Kelvin Kamfwa

Theoretical and Applied Genetics November 2023; vol. 136, Article number: 222

Key Message

Quantitative Trait Loci “hotspots” for drought tolerance were identified on chromosomes Pv06, Pv07 and Pv10 of common bean.

Abstract

Drought is a major production constraint of common bean (Phaseolus vulgaris L.) worldwide. The objective of this study was to identify the Quantitative Trait Loci (QTL) for drought tolerance in an Andean population of Recombinant Inbred Lines (RILs). A total of 155 F_5:7 RILs derived from a cross between Kijivu (drought tolerant) and Bukoba (drought susceptible) were evaluated for drought tolerance in field and pot experiments. Four field experiments were conducted at three locations in Zambia in 2020 and 2021. All field trials were conducted in the dry season under irrigation. The 155 RILs were genotyped with 11,292 SNPs, and composite interval mapping was conducted to identify QTL for drought tolerance. Seed yield for Kijivu under drought stress was consistently higher than for Bukoba across all four field trials. A total of 60 QTL were identified for morphological, agronomic, and physiological traits under drought stress and non-stress conditions. However, the majority of these QTL were specific to drought stress. QTL “hotspots” for drought tolerance were identified on chromosomes Pv06, Pv07, and Pv10. Extensive co-localizations for agronomic and morpho-physiological traits under drought stress were observed at the three drought-tolerance QTL hotspots. Additionally, these three QTL hotspots overlapped with previously identified QTL for drought tolerance, while several others identified QTL are novel. The three identified QTL hotspots could be used in future marker-assisted selection for drought tolerance in common bean.

See https://link.springer.com/article/10.1007/s00122-023-04463-2