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Gene–allele system of shade tolerance in southern China soybean germplasm revealed by genome-wide association study using gene–allele sequence as markers
Gene–allele system of shade tolerance in southern China soybean germplasm revealed by genome-wide association study using gene–allele sequence as markers

Shade tolerance is a key for optimal cultivation of soybean inter/relay-cropped with corn. To explore the shade tolerance gene–allele system in the southern China soybean germplasm, we proposed using gene–allele sequence markers (GASMs) in a restricted two-stage multi-locus model genome-wide association study (GASM-RTM-GWAS). A representative sample with 394 accessions was tested for their shade tolerance index (STI), in Nanning, China.

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